link 'CharacterList' in package 'IRanges' does not exist and so has been treated as a topic
    replaceLetterAt                         html  
Rd warning: /builddir/build/BUILD/Biostrings/Biostrings/man/replaceLetterAt.Rd:43: file link 'Rle' in package 'S4Vectors' does not exist and so has been treated as a topic
    reverseComplement                       html  
Rd warning: /builddir/build/BUILD/Biostrings/Biostrings/man/reverseComplement.Rd:48: file link 'reverse' in package 'IRanges' does not exist and so has been treated as a topic
Rd warning: /builddir/build/BUILD/Biostrings/Biostrings/man/reverseComplement.Rd:71: file link 'reverse' in package 'IRanges' does not exist and so has been treated as a topic
    stringDist                              html  
    substitution_matrices                   html  
    toComplex                               html  
    translate                               html  
    trimLRPatterns                          html  
    xscat                                   html  
    yeastSEQCHR1                            html  
BUILDSTDERR: ** building package indices
BUILDSTDERR: ** installing vignettes
BUILDSTDERR: ** testing if installed package can be loaded
BUILDSTDERR: * DONE (Biostrings)
+ test -d Biostrings/src
+ cd Biostrings/src
+ rm -f BAB_class.o BitMatrix.o IRanges_stubs.o MIndex_class.o PreprocessedTB_class.o R_init_Biostrings.o RoSeqs_utils.o S4Vectors_stubs.o SparseList_utils.o XStringSetList_class.o XStringSet_class.o XStringSet_io.o XString_class.o XVector_stubs.o align_needwunsQS.o align_pairwiseAlignment.o align_utils.o find_palindromes.o gtestsim.o inject_code.o letter_frequency.o lowlevel_matching.o match_PWM.o match_pattern.o match_pattern_boyermoore.o match_pattern_indels.o match_pattern_shiftor.o match_pdict.o match_pdict_ACtree2.o match_pdict_Twobit.o match_pdict_utils.o match_reporting.o matchprobes.o pmatchPattern.o replaceAt.o replace_letter_at.o strutils.o translate.o unstrsplit_methods.o utils.o xscat.o Biostrings.so
+ rm -rf /builddir/build/BUILDROOT/R-Biostrings-2.48.0-1.fc29.riscv64/usr/lib64/R/library/R.css
+ rm -f /builddir/build/BUILDROOT/R-Biostrings-2.48.0-1.fc29.riscv64/usr/lib64/R/library/Biostrings/doc/GenomeSearching.R
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
BUILDSTDERR: /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip /usr/bin/strip
+ /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.agLbG5
Processing files: R-Biostrings-2.48.0-1.fc29.riscv64
Provides: R-Biostrings = 2.48.0-1.fc29 R-Biostrings(riscv-64) = 2.48.0-1.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH)
Processing files: R-Biostrings-devel-2.48.0-1.fc29.riscv64
Provides: R-Biostrings-devel = 2.48.0-1.fc29 R-Biostrings-devel(riscv-64) = 2.48.0-1.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-Biostrings-2.48.0-1.fc29.riscv64
Wrote: /builddir/build/RPMS/R-Biostrings-2.48.0-1.fc29.riscv64.rpm
Wrote: /builddir/build/RPMS/R-Biostrings-devel-2.48.0-1.fc29.riscv64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.pPhINn
+ umask 022
+ cd /builddir/build/BUILD
+ cd Biostrings
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-Biostrings-2.48.0-1.fc29.riscv64
+ exit 0
Child return code was: 0