Tue, 21 Jan 2025 12:36:35 UTC | login

Information for build openms-2.4.0-6.fc31

ID124239
Package Nameopenms
Version2.4.0
Release6.fc31
Epoch
Sourcegit+https://src.fedoraproject.org/rpms/openms.git#48606c29b6a0a00cb888be0c2ac0db3da680d28f
SummaryLC/MS data management and analyses
DescriptionOpenMS is a C++ library for LC-MS data management and analyses. It offers an infrastructure for the rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, MacOSX and Linux. It comes with a vast variety of pre-built and ready-to-use tools for proteomics and metabolomics data analysis (TOPPTools) and powerful 2D and 3D visualization(TOPPView). OpenMS offers analyses for various quantitation protocols, including label-free quantitation, SILAC, iTRAQ, SRM, SWATH, etc. It provides built-in algorithms for de-novo identification and database search, as well as adapters to other state-of-the art tools like XTandem, Mascot, OMSSA, etc. It supports easy integration of OpenMS built tools into workflow engines like Knime, Galaxy, WS-Pgrade, and TOPPAS via the TOPPtools concept and a unified parameter handling via a 'common tool description' (CTD) scheme. The OpenMS Proteomics Pipeline is a pipeline for the analysis of HPLC-MS data. It consists of several small applications that can be chained to create analysis pipelines tailored for a specific problem. The TOPP tools are divided into several subgroups: - Graphical Tools - File Handling - Signal Processing and Preprocessing - Quantitation - Map Alignment - Protein/Peptide Identification - Protein/Peptide Processing - Targeted Experiments - Peptide Property Prediction - Misc
Built bydavidlt
State failed
Volume DEFAULT
StartedSat, 21 Sep 2019 16:27:19 UTC
CompletedSat, 21 Sep 2019 17:09:02 UTC
Taskbuild (f31-candidate, /rpms/openms.git:48606c29b6a0a00cb888be0c2ac0db3da680d28f)
Extra{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/openms.git#48606c29b6a0a00cb888be0c2ac0db3da680d28f'}}
Tags No tags
RPMs No RPMs
Changelog * Thu Jul 25 2019 Fedora Release Engineering <releng@fedoraproject.org> - 2.4.0-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Thu Jun 27 2019 Jerry James <loganjerry@gmail.com> - 2.4.0-5 - Rebuild for coin-or package updates * Fri Feb 01 2019 Fedora Release Engineering <releng@fedoraproject.org> - 2.4.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Wed Jan 30 2019 Jonathan Wakely <jwakely@redhat.com> - 2.4.0-3 - Rebuilt for Boost 1.69 * Tue Nov 06 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.4.0-2 - Add rpmlintrc file * Tue Oct 30 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.4.0-1 - Release 2.4.0 - Disable Python3 binding - Drop Python2 binding - Use Qt5 * Wed Aug 22 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-14 - Patched for removing unrecognized command line options * Wed Aug 22 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-13 - Deprecate Python2 binding of fedora 30+ * Fri Jul 13 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2.3.0-12 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Miro Hrončok <mhroncok@redhat.com> - 2.3.0-11 - Rebuilt for Python 3.7 * Mon May 21 2018 Jerry James <loganjerry@gmail.com> - 2.3.0-10 - Rebuild for glpk 4.65 * Wed Mar 07 2018 Adam Williamson <awilliam@redhat.com> - 2.3.0-9 - Rebuild to fix GCC 8 mis-compilation See https://da.gd/YJVwk ("GCC 8 ABI change on x86_64") * Mon Feb 12 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-8 - Fix XML file's permissions * Sun Feb 11 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-7 - Compile pyOpenMS - Set Python2 required packages - Fix R scripts shebang * Thu Feb 08 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2.3.0-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Mon Feb 05 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-5 - Rebuild for boost-1.66 - Remove obsolete scriptlets * Wed Jan 10 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-4 - Set maximum required version of seqan * Fri Jan 05 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-3 - Tests disabled * Fri Jan 05 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-2 - Fix R script * Wed Jan 03 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.3.0-1 - Update to OpenMS-2.3.0 - Drop obsolete GCC7 patches * Thu Dec 21 2017 Antonio Trande <sagitter@fedoraproject.org> - 2.2.0-7 - Appdata file moved into metainfo data directory * Mon Nov 13 2017 Antonio Trande <sagitter@fedoraproject.org> - 2.2.0-6 - Rebuild OpenMS-2.2.0 - Remove obsolete patch * Fri Oct 13 2017 Antonio Trande <sagitter@fedoraproject.org> - 2.2.0-5 - Rebuild for wildmagic5-5.17