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Information for RPM R-GenomicAlignments-1.32.1-4.fc40.riscv64.rpm

ID1072032
NameR-GenomicAlignments
Version1.32.1
Release4.fc40
Epoch
Archriscv64
SummaryRepresentation and manipulation of short genomic alignments
DescriptionProvides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
Build Time2023-11-08 16:31:07 GMT
Size2.12 MB
ff5a4119d997f59913971f9312adde8f
LicenseArtistic 2.0
Buildrootf40-build-737672-107292
Provides
R(GenomicAlignments) = 1.32.1
R-GenomicAlignments = 1.32.1-4.fc40
R-GenomicAlignments(riscv-64) = 1.32.1-4.fc40
Obsoletes No Obsoletes
Conflicts No Conflicts
Requires
R(ABI) = 4.3
R(BiocGenerics) >= 0.37.0
R(BiocParallel)
R(Biostrings) >= 2.55.7
R(GenomeInfoDb) >= 1.13.1
R(GenomicRanges) >= 1.41.5
R(IRanges) >= 2.23.9
R(Rsamtools) >= 1.31.2
R(S4Vectors) >= 0.27.12
R(SummarizedExperiment) >= 1.9.13
R(methods)
R(stats)
R(utils)
R-core >= 4.0.0
ld-linux-riscv64-lp64d.so.1()(64bit)
ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit)
libR.so()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.27)(64bit)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1
rtld(GNU_HASH)
Recommends No Recommends
Suggests
R(BSgenome)
R(RUnit)
R(rtracklayer)
Supplements No Supplements
Enhances No Enhances
Files
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1 through 50 of 385 >>>
Name descending sort Size
/usr/lib64/R/library/GenomicAlignments/unitTests/test_summarizeOverlaps-methods.R12.27 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_readGAlignmentsList.R7.36 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_readGAlignments.R2.20 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_readGAlignmentPairs.R11.97 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_intra-range-methods.R1.60 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_findSpliceOverlaps-methods.R9.72 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_coordinate-mapping-methods.R5.87 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_cigar-utils.R4.27 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_GAlignmentsList-class.R4.93 KB
/usr/lib64/R/library/GenomicAlignments/unitTests/test_GAlignments-class.R1.15 KB
/usr/lib64/R/library/GenomicAlignments/unitTests0.00 B
/usr/lib64/R/library/GenomicAlignments/libs/GenomicAlignments.so72.64 KB
/usr/lib64/R/library/GenomicAlignments/libs0.00 B
/usr/lib64/R/library/GenomicAlignments/html/summarizeOverlaps-methods.html27.44 KB
/usr/lib64/R/library/GenomicAlignments/html/stackStringsFromGAlignments.html14.00 KB
/usr/lib64/R/library/GenomicAlignments/html/setops-methods.html3.22 KB
/usr/lib64/R/library/GenomicAlignments/html/sequenceLayer.html16.02 KB
/usr/lib64/R/library/GenomicAlignments/html/readGAlignments.html23.33 KB
/usr/lib64/R/library/GenomicAlignments/html/pileLettersAt.html8.02 KB
/usr/lib64/R/library/GenomicAlignments/html/junctions-methods.html20.90 KB
/usr/lib64/R/library/GenomicAlignments/html/intra-range-methods.html6.64 KB
/usr/lib64/R/library/GenomicAlignments/html/findSpliceOverlaps-methods.html8.93 KB
/usr/lib64/R/library/GenomicAlignments/html/findOverlaps-methods.html6.97 KB
/usr/lib64/R/library/GenomicAlignments/html/findMateAlignment.html13.84 KB
/usr/lib64/R/library/GenomicAlignments/html/findCompatibleOverlaps-methods.html5.81 KB
/usr/lib64/R/library/GenomicAlignments/html/encodeOverlaps-methods.html10.87 KB
/usr/lib64/R/library/GenomicAlignments/html/coverage-methods.html8.76 KB
/usr/lib64/R/library/GenomicAlignments/html/coordinate-mapping-methods.html12.95 KB
/usr/lib64/R/library/GenomicAlignments/html/cigar-utils.html21.20 KB
/usr/lib64/R/library/GenomicAlignments/html/R.css1.80 KB
/usr/lib64/R/library/GenomicAlignments/html/OverlapEncodings-class.html14.05 KB
/usr/lib64/R/library/GenomicAlignments/html/GappedReads-class.html2.65 KB
/usr/lib64/R/library/GenomicAlignments/html/GAlignmentsList-class.html14.72 KB
/usr/lib64/R/library/GenomicAlignments/html/GAlignments-class.html19.86 KB
/usr/lib64/R/library/GenomicAlignments/html/GAlignmentPairs-class.html17.62 KB
/usr/lib64/R/library/GenomicAlignments/html/00Index.html34.11 KB
/usr/lib64/R/library/GenomicAlignments/html0.00 B
/usr/lib64/R/library/GenomicAlignments/help/windows+2CGAlignments-method.html161.00 B
/usr/lib64/R/library/GenomicAlignments/help/width+2CGAlignments-method.html159.00 B
/usr/lib64/R/library/GenomicAlignments/help/validCigar.html153.00 B
/usr/lib64/R/library/GenomicAlignments/help/updateObject+2CGAlignments-method.html159.00 B
/usr/lib64/R/library/GenomicAlignments/help/updateObject+2CGAlignmentPairs-method.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/update+2CGAlignments-method.html159.00 B
/usr/lib64/R/library/GenomicAlignments/help/unlist+2CGAlignmentPairs-method.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps.html167.00 B
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps-methods.html167.00 B
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps+2CGRangesList+2Ccharacter-method.html167.00 B
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps+2CGRangesList+2CGRangesList-method.html167.00 B
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps+2CGRangesList+2CGRanges-method.html167.00 B
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps+2CGRangesList+2CGAlignmentsList-method.html167.00 B
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Buildroot descending sort Created State
f40-build-789341-135682 2024-03-07 21:07:02 expired