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Information for RPM R-GenomicAlignments-1.32.1-4.fc40.riscv64.rpm

ID1072032
NameR-GenomicAlignments
Version1.32.1
Release4.fc40
Epoch
Archriscv64
SummaryRepresentation and manipulation of short genomic alignments
DescriptionProvides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
Build Time2023-11-08 16:31:07 GMT
Size2.12 MB
ff5a4119d997f59913971f9312adde8f
LicenseArtistic 2.0
Buildrootf40-build-737672-107292
Provides
R(GenomicAlignments) = 1.32.1
R-GenomicAlignments = 1.32.1-4.fc40
R-GenomicAlignments(riscv-64) = 1.32.1-4.fc40
Obsoletes No Obsoletes
Conflicts No Conflicts
Requires
R(ABI) = 4.3
R(BiocGenerics) >= 0.37.0
R(BiocParallel)
R(Biostrings) >= 2.55.7
R(GenomeInfoDb) >= 1.13.1
R(GenomicRanges) >= 1.41.5
R(IRanges) >= 2.23.9
R(Rsamtools) >= 1.31.2
R(S4Vectors) >= 0.27.12
R(SummarizedExperiment) >= 1.9.13
R(methods)
R(stats)
R(utils)
R-core >= 4.0.0
ld-linux-riscv64-lp64d.so.1()(64bit)
ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit)
libR.so()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.27)(64bit)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1
rtld(GNU_HASH)
Recommends No Recommends
Suggests
R(BSgenome)
R(RUnit)
R(rtracklayer)
Supplements No Supplements
Enhances No Enhances
Files
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/usr/lib/.build-id0.00 B
/usr/lib/.build-id/530.00 B
/usr/lib/.build-id/53/6fc9357fe872af74141f10a4beef2cbda9695b75.00 B
/usr/lib64/R/library/GenomicAlignments0.00 B
/usr/lib64/R/library/GenomicAlignments/CITATION940.00 B
/usr/lib64/R/library/GenomicAlignments/DESCRIPTION2.47 KB
/usr/lib64/R/library/GenomicAlignments/INDEX2.00 KB
/usr/lib64/R/library/GenomicAlignments/Meta0.00 B
/usr/lib64/R/library/GenomicAlignments/Meta/Rd.rds2.88 KB
/usr/lib64/R/library/GenomicAlignments/Meta/features.rds123.00 B
/usr/lib64/R/library/GenomicAlignments/Meta/hsearch.rds3.02 KB
/usr/lib64/R/library/GenomicAlignments/Meta/links.rds2.35 KB
/usr/lib64/R/library/GenomicAlignments/Meta/nsInfo.rds1.32 KB
/usr/lib64/R/library/GenomicAlignments/Meta/package.rds1.92 KB
/usr/lib64/R/library/GenomicAlignments/Meta/vignette.rds543.00 B
/usr/lib64/R/library/GenomicAlignments/NAMESPACE5.06 KB
/usr/lib64/R/library/GenomicAlignments/NEWS11.13 KB
/usr/lib64/R/library/GenomicAlignments/R0.00 B
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments1.03 KB
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments.rdb1.31 MB
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments.rdx7.86 KB
/usr/lib64/R/library/GenomicAlignments/doc0.00 B
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.R1.39 KB
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.Rnw5.52 KB
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.pdf86.50 KB
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.R31.27 KB
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.Rnw57.25 KB
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.pdf277.51 KB
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.R5.07 KB
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.Rnw14.08 KB
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.pdf209.61 KB
/usr/lib64/R/library/GenomicAlignments/doc/index.html3.44 KB
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.R7.50 KB
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.Rnw13.28 KB
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.pdf199.08 KB
/usr/lib64/R/library/GenomicAlignments/extdata0.00 B
/usr/lib64/R/library/GenomicAlignments/extdata/sm_treated1.bam50.88 KB
/usr/lib64/R/library/GenomicAlignments/extdata/sm_untreated1.bam92.78 KB
/usr/lib64/R/library/GenomicAlignments/help0.00 B
/usr/lib64/R/library/GenomicAlignments/help/+5B+5B+2CGAlignmentPairs+2CANY+2CANY-method.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/AnIndex15.08 KB
/usr/lib64/R/library/GenomicAlignments/help/CIGAR_OPS.html153.00 B
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentPairs-class.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentPairs.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/GAlignments-class.html159.00 B
/usr/lib64/R/library/GenomicAlignments/help/GAlignments.html159.00 B
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentsList-class.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentsList.html163.00 B
/usr/lib64/R/library/GenomicAlignments/help/GappedReads-class.html159.00 B
/usr/lib64/R/library/GenomicAlignments/help/GappedReads.html159.00 B
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f40-build-789341-135682 2024-03-07 21:07:02 expired