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Information for RPM R-ape-5.3-3.fc31.src.rpm

ID	469616
Name	R-ape
Version	5.3
Release	3.fc31
Epoch
Arch	src
Summary	Analyses of Phylogenetics and Evolution
Description	Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
Build Time	2019-08-31 10:29:18 GMT
Size	784.98 KB
SIGMD5	215029826ef70ca736ac2c3a3931fa43
License	GPLv2+
Buildroot	f31-build-97137-32906
Provides	No Provides
Obsoletes	No Obsoletes
Conflicts	No Conflicts
Requires	R-Rcpp-devel >= 0.12.0 R-devel R-expm R-gee R-graphics R-igraph R-lattice R-methods R-nlme R-parallel R-stats R-tools R-utils rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 tex(latex)
Recommends	No Recommends
Suggests	No Suggests
Supplements	No Supplements
Enhances	No Enhances
Files	1 through 2 of 2 Name Size R-ape.spec 3.79 KB ape_5.3.tar.gz 774.49 KB
Component of	No Buildroots